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Transfer Learning via \ell_1 Regularization

Neural Information Processing Systems

Machine learning algorithms typically require abundant data under a stationary environment. However, environments are nonstationary in many real-world applications. Critical issues lie in how to effectively adapt models under an ever-changing environment. We propose a method for transferring knowledge from a source domain to a target domain via $\ell_1$ regularization in high dimension. We incorporate $\ell_1$ regularization of differences between source and target parameters in addition to an ordinary $\ell_1$ regularization.


Estimating Brain Activity with High Spatial and Temporal Resolution using a Naturalistic MEG-fMRI Encoding Model

arXiv.org Artificial Intelligence

Current non-invasive neuroimaging techniques trade off between spatial resolution and temporal resolution. While magnetoencephalography (MEG) can capture rapid neural dynamics and functional magnetic resonance imaging (fMRI) can spatially localize brain activity, a unified picture that preserves both high resolutions remains an unsolved challenge with existing source localization or MEG-fMRI fusion methods, especially for single-trial naturalistic data. We collected whole-head MEG when subjects listened passively to more than seven hours of narrative stories, using the same stimuli in an open fMRI dataset (LeBel et al., 2023). We developed a transformer-based encoding model that combines the MEG and fMRI from these two naturalistic speech comprehension experiments to estimate latent cortical source responses with high spatiotemporal resolution. Our model is trained to predict MEG and fMRI from multiple subjects simultaneously, with a latent layer that represents our estimates of reconstructed cortical sources. Our model predicts MEG better than the common standard of single-modality encoding models, and it also yields source estimates with higher spatial and temporal fidelity than classic minimum-norm solutions in simulation experiments. We validated the estimated latent sources by showing its strong generalizability across unseen subjects and modalities. Estimated activity in our source space predict electrocorticography (ECoG) better than an ECoG-trained encoding model in an entirely new dataset. By integrating the power of large naturalistic experiments, MEG, fMRI, and encoding models, we propose a practical route towards millisecond-and-millimeter brain mapping.


Transfer Learning via \ell_1 Regularization

Neural Information Processing Systems

Machine learning algorithms typically require abundant data under a stationary environment. However, environments are nonstationary in many real-world applications. Critical issues lie in how to effectively adapt models under an ever-changing environment. We propose a method for transferring knowledge from a source domain to a target domain via \ell_1 regularization in high dimension. We incorporate \ell_1 regularization of differences between source and target parameters in addition to an ordinary \ell_1 regularization.


Music Separation Enhancement with Generative Modeling

arXiv.org Artificial Intelligence

Despite phenomenal progress in recent years, state-of-the-art music separation systems produce source estimates with significant perceptual shortcomings, such as adding extraneous noise or removing harmonics. We propose a post-processing model (the Make it Sound Good (MSG) post-processor) to enhance the output of music source separation systems. We apply our post-processing model to state-of-the-art waveform-based and spectrogram-based music source separators, including a separator unseen by MSG during training. Our analysis of the errors produced by source separators shows that waveform models tend to introduce more high-frequency noise, while spectrogram models tend to lose transients and high frequency content. We introduce objective measures to quantify both kinds of errors and show MSG improves the source reconstruction of both kinds of errors. Crowdsourced subjective evaluations demonstrate that human listeners prefer source estimates of bass and drums that have been post-processed by MSG.


Multi-subject MEG/EEG source imaging with sparse multi-task regression

arXiv.org Machine Learning

Magnetoencephalography and electroencephalography (M/EEG) are non-invasive modalities that measure the weak electromagnetic fields generated by neural activity. Estimating the location and magnitude of the current sources that generated these electromagnetic fields is a challenging ill-posed regression problem known as \emph{source imaging}. When considering a group study, a common approach consists in carrying out the regression tasks independently for each subject. An alternative is to jointly localize sources for all subjects taken together, while enforcing some similarity between them. By pooling all measurements in a single multi-task regression, one makes the problem better posed, offering the ability to identify more sources and with greater precision. The Minimum Wasserstein Estimates (MWE) promotes focal activations that do not perfectly overlap for all subjects, thanks to a regularizer based on Optimal Transport (OT) metrics. MWE promotes spatial proximity on the cortical mantel while coping with the varying noise levels across subjects. On realistic simulations, MWE decreases the localization error by up to 4 mm per source compared to individual solutions. Experiments on the Cam-CAN dataset show a considerable improvement in spatial specificity in population imaging. Our analysis of a multimodal dataset shows how multi-subject source localization closes the gap between MEG and fMRI for brain mapping.


Contextual Minimum-Norm Estimates (CMNE): A Deep Learning Method for Source Estimation in Neuronal Networks

arXiv.org Machine Learning

Neural currents in the brain can be estimated from MEG/EEG recordings by solving the inverse problem (Hamalainen et al. 1993; Mosher, Leahy, and Lewis 1999) . The inverse problem is ill - posed: several current distributions can produce the same or similar electric and magnetic fields outside the head and the e stimates therefore become sensitive to measurement noise (Hamalainen et al. 1993; Helmholtz 1853) . These difficulties limit the spatial resolution and reliability of neural current estimates derived from MEG/EEG signals. To deal with this ill - posedness of the inve rse problem, constraints limiting the space of possible neural current configurations and regularization are often used. Solving the inverse problem requires a forward model that calculates the MEG/EEG signals from given current distributions in the brain (Sarvas 1987; Mosher, Leahy, and Lewis 1999; Stenroos, Hunold, and Haueisen 2014) . Popular methods for solving the inverse problem include discrete current dipole models (Schneider 1972; Scherg and Cramon 1985; Moshe r, Lewis, and Leahy 1992; Leahy et al. 1998) as well as distributed current models (Hamalainen and Ilmoniemi 1994; Uutela, Hamalainen, and Somersalo 1999; Baillet, Mosher, and Leahy 2001; Stenbacka et al. 2002) . Importantly, most source estimation methods are derived sample by sample, i.e., without assuming any relationship between the current distributions across time.


The iterative reweighted Mixed-Norm Estimate for spatio-temporal MEG/EEG source reconstruction

arXiv.org Machine Learning

Source imaging based on magnetoencephalography (MEG) and electroencephalography (EEG) allows for the non-invasive analysis of brain activity with high temporal and good spatial resolution. As the bioelectromagnetic inverse problem is ill-posed, constraints are required. For the analysis of evoked brain activity, spatial sparsity of the neuronal activation is a common assumption. It is often taken into account using convex constraints based on the l1-norm. The resulting source estimates are however biased in amplitude and often suboptimal in terms of source selection due to high correlations in the forward model. In this work, we demonstrate that an inverse solver based on a block-separable penalty with a Frobenius norm per block and a l0.5-quasinorm over blocks addresses both of these issues. For solving the resulting non-convex optimization problem, we propose the iterative reweighted Mixed Norm Estimate (irMxNE), an optimization scheme based on iterative reweighted convex surrogate optimization problems, which are solved efficiently using a block coordinate descent scheme and an active set strategy. We compare the proposed sparse imaging method to the dSPM and the RAP-MUSIC approach based on two MEG data sets. We provide empirical evidence based on simulations and analysis of MEG data that the proposed method improves on the standard Mixed Norm Estimate (MxNE) in terms of amplitude bias, support recovery, and stability.


A Sparse Non-Parametric Approach for Single Channel Separation of Known Sounds

Neural Information Processing Systems

In this paper we present an algorithm for separating mixed sounds from a monophonic recording. Our approach makes use of training data which allows us to learn representations of the types of sounds that compose the mixture. In contrast to popular methods that attempt to extract com- pact generalizable models for each sound from training data, we employ the training data itself as a representation of the sources in the mixture. We show that mixtures of known sounds can be described as sparse com- binations of the training data itself, and in doing so produce significantly better separation results as compared to similar systems based on compact statistical models.


Bayesian Source Localization with the Multivariate Laplace Prior

Neural Information Processing Systems

We introduce a novel multivariate Laplace (MVL) distribution as a sparsity promoting prior for Bayesian source localization that allows the specification of constraints between and within sources. We represent the MVL distribution as a scale mixture that induces a coupling between source variances instead of their means. Approximation of the posterior marginals using expectation propagation is shown to be very efficient due to properties of the scale mixture representation. The computational bottleneck amounts to computing the diagonal elements of a sparse matrix inverse. Our approach is illustrated using a mismatch negativity paradigm for which MEG data and a structural MRI have been acquired. We show that spatial coupling leads to sources which are active over larger cortical areas as compared with an uncoupled prior.


Blind channel identification for speech dereverberation using l1-norm sparse learning

Neural Information Processing Systems

Speech dereverberation remains an open problem after more than three decades of research. The most challenging step in speech dereverberation is blind channel identification (BCI). Although many BCI approaches have been developed, their performance is still far from satisfactory for practical applications. The main difficulty in BCI lies in finding an appropriate acoustic model, which not only can effectively resolve solution degeneracies due to the lack of knowledge of the source, but also robustly models real acoustic environments. This paper proposes a sparse acoustic room impulse response (RIR) model for BCI, that is, an acoustic RIR can be modeled by a sparse FIR filter.